PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AS_D0C21ADB5.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 126aa    MW: 13479.6 Da    PI: 9.1922
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AS_D0C21ADB5.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY40.55.4e-1390116127
                            ---SS-EEEEEEE--TT-SS-EEEEEE CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrC 27 
                            ldDgy+WrKYGqK vk+++fprs   C
  Traes_2AS_D0C21ADB5.1  90 LDDGYRWRKYGQKAVKNNNFPRSVNPC 116
                            59********************97666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.7E-1475116IPR003657WRKY domain
SuperFamilySSF1182902.22E-1182117IPR003657WRKY domain
PROSITE profilePS5081115.36585126IPR003657WRKY domain
SMARTSM007743.6E-590125IPR003657WRKY domain
PfamPF031061.1E-991118IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MAGASSHDHL HHHGQAAGNN TGGGGGLGQG LFSGSKQEDP SESKDGGDDR AGSSSQGGGE  60
ADVVVGKKKG EKRERRPRFA FQTRSQVDIL DDGYRWRKYG QKAVKNNNFP RSVNPCPNFS  120
YDTLTC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF3683631e-129EF368363.1 Triticum aestivum WRKY transcription factor (WRKY72-b) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003577566.11e-33PREDICTED: probable WRKY transcription factor 75
SwissprotQ9C9832e-21WRK57_ARATH; Probable WRKY transcription factor 57
TrEMBLW5B4U72e-89W5B4U7_WHEAT; Uncharacterized protein
STRINGMLOC_36657.12e-44(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP110038133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.12e-20WRKY DNA-binding protein 75
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]